miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005789
species: Triticum aestivum
miRNA family: MIR2032
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTAGATACTCCCTAAGGCTT

miRNA*
 GCCTTAGTGAATATCTACACT

mismatches: 2
bulges: 0
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pre-miRNA
 CAAAAGACGAGATGTGCACACAAAGCTTTAAGCACTAATTAAGCCTTAGTGAATATCTACACTAGTAAGTTTTTCTTCATGTTTGAAATGCTTAGCATTG
TAGATACTCCCTAAGGCTTGGGTGGTATTGCGTTGTGTGGCCACTCGATCAACTTTGG

dot-bracket secondary structure
.....((((((.((.((((((((.((..((..((((...((((((((((.((.((((((((....(((((.((((.........)))).)))))....))
)))))).)).)))))))))))))).))..)).)))))).)))))))).))........


SIMILARITIES
miRBase bdi-MIR5200: 0.0001

PMRD tae-miR2032: 1e-47

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: tae-miR2032 from PMRD (MNEST054751)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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